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#chaining #sequence-to-sequence #alignment #mechanism #generic #sequence-alignment #seeding

seed_chain

by Sebastian Schmidt

4 releases (2 breaking)

new 0.7.1 Jan 17, 2025
0.7.0 Jan 17, 2025
0.6.0 Dec 19, 2024
0.0.0 Dec 5, 2024

#6 in #chaining

Download history 139/week @ 2024-12-04 9/week @ 2024-12-11 121/week @ 2024-12-18 7/week @ 2025-01-08

128 downloads per month
Used in 3 crates (via lib_tsalign)

BSD-2-Clause

38KB
911 lines

A seeding and generic chaining mechanism for sequence-to-sequence alignment

Dependencies

~2.5MB
~56K SLoC