Lib.rs

› Science › Biology › Exon
#object-storage #bioinformatics #execution-engine #exon #file-format #proteomics #arrow

exon-common

Common utilities for Exon

by Trent Hauck and 2 contributors

78 releases (29 breaking)

0.32.4 Dec 21, 2024
0.32.2 Sep 4, 2024
0.29.1 Jul 16, 2024
0.15.0 Mar 27, 2024
0.5.3 Nov 29, 2023

#337 in Biology

Download history 18/week @ 2024-11-14 50/week @ 2024-11-21 58/week @ 2024-11-28 137/week @ 2024-12-05 314/week @ 2024-12-12 281/week @ 2024-12-19 21/week @ 2024-12-26 17/week @ 2025-01-02 17/week @ 2025-01-09 56/week @ 2025-01-16 6/week @ 2025-01-23 14/week @ 2025-01-30 31/week @ 2025-02-06 324/week @ 2025-02-13 36/week @ 2025-02-20 68/week @ 2025-02-27

461 downloads per month
Used in 19 crates (16 directly)

Apache-2.0

11KB
125 lines

Exon

Exon is an execution engine designed to work with bioinformatics data. It features:

  • SQL based access to bioinformatics data -- general DML and some DDL support
  • Support for many file formats from bioinformatics, proteomics, and others
  • Local filesystem and object storage support
  • Arrow FFI primitives for multi-language support

Installation

Exon is available via crates.io. To install, run:

cargo add exon

Documentation

  • Rust documentation is available here.
  • General documentation is available here.

Benchmarks

Please see the benchmarks README for more information.

lib.rs:

Common utilities for Exon.

Dependencies

~70MB
~1.5M SLoC