25 releases (breaking)

0.19.0 Feb 13, 2025
0.18.0 Dec 21, 2024
0.17.2 Nov 15, 2024
0.15.0 Jul 27, 2024
0.1.1 Mar 13, 2018

#28 in Biology

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438 downloads per month
Used in 2 crates

BSD-3-Clause

470KB
12K SLoC

sourmash

🦀 Rust API Documentation on docs.rs build-status codecov License: 3-Clause BSD


Compute MinHash signatures for nucleotide (DNA/RNA) and protein sequences.

This is the core library used by sourmash. It exposes a C API that can be called from FFI in other languages, and it is how we use it in Python for building the sourmash application (CLI and Python API).


sourmash is a product of the Lab for Data-Intensive Biology at the UC Davis School of Veterinary Medicine.

Support

Please ask questions and files issues on Github.

Development

Development happens on github at sourmash-bio/sourmash.

Minimum supported Rust version

Currently the minimum supported Rust version is 1.74.0.

Dependencies

~18–27MB
~484K SLoC