#dna #sequence #region

bin+lib sdust

Implementation of symmetric DUST algorithm, with optional CLI

1 unstable release

0.1.0 May 5, 2022

#349 in Biology

MIT license

17KB
335 lines

Symmetric DUST implementation

Finds low-complexity regions in DNA sequences.

Comes with an optional binary that can be used similarly to dustmasker, although it currently only supports fasta output, both soft, equivalent to --outfmt fasta of dustmasker, or hard that replace all masked bases by Ns.

Dependencies

~0–650KB
~11K SLoC