33 releases (11 breaking)

new 0.12.1 Jan 22, 2025
0.11.2 Jan 22, 2025
0.11.0 Dec 20, 2024
0.9.0 Nov 29, 2024

#100 in Biology

Download history 1113/week @ 2024-11-18 731/week @ 2024-11-25 892/week @ 2024-12-02 832/week @ 2024-12-09 230/week @ 2024-12-16 41/week @ 2024-12-23 36/week @ 2024-12-30 228/week @ 2025-01-06 56/week @ 2025-01-13 389/week @ 2025-01-20

714 downloads per month
Used in 5 crates

MIT license

98KB
2.5K SLoC

common kits

  • gsbam: bam related kits
  • fastx_reader: fasta/fastq reader
  • file_reader: bed and vcf reader
  • pbar: progress bar
  • samtools: call samtools shell command
  • dna: dna utils
  • phreq: phreq and quality utils

ChangeLog

0.9.0

0.8.6

    • phreq.rs
    • gsbam::build_pg_header, gsbam::read_bam
    • ds::name2idx_and_seq, ds::name2seq, ds::idx2name_and_seq

0.8.2

  • compute_qend

Dependencies

~27–39MB
~629K SLoC