38 releases (13 breaking)

new 0.14.2 Mar 13, 2025
0.13.2 Mar 6, 2025
0.11.0 Dec 20, 2024
0.9.0 Nov 29, 2024

#80 in Biology

Download history 1441/week @ 2024-11-20 621/week @ 2024-11-27 1085/week @ 2024-12-04 455/week @ 2024-12-11 206/week @ 2024-12-18 31/week @ 2024-12-25 54/week @ 2025-01-01 250/week @ 2025-01-08 23/week @ 2025-01-15 403/week @ 2025-01-22 12/week @ 2025-01-29 44/week @ 2025-02-05 13/week @ 2025-02-12 145/week @ 2025-02-19 32/week @ 2025-02-26 327/week @ 2025-03-05

517 downloads per month
Used in 6 crates (5 directly)

MIT license

100KB
2.5K SLoC

common kits

  • gsbam: bam related kits
  • fastx_reader: fasta/fastq reader
  • file_reader: bed and vcf reader
  • pbar: progress bar
  • samtools: call samtools shell command
  • dna: dna utils
  • phreq: phreq and quality utils

ChangeLog

0.14.1

    • collections_ext::counter::Counter

0.13.0

  • change ReadInfo interface

0.9.0

0.8.6

    • phreq.rs
    • gsbam::build_pg_header, gsbam::read_bam
    • ds::name2idx_and_seq, ds::name2seq, ds::idx2name_and_seq

0.8.2

  • compute_qend

Dependencies

~28–40MB
~651K SLoC