4 releases
0.2.4 | Apr 3, 2025 |
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0.2.3 | Mar 30, 2025 |
0.1.0 | Mar 24, 2025 |
#160 in Biology
569 downloads per month
32KB
413 lines
codonrs
Calculate relative synonymous codon usage (RSCU) for coding DNA sequences (CDS).
Usage
codonrs [Optional: -t <translation table>] -i <input.fasta> -o <prefix for output CSV files>
<translation table>
- (Optional) an integer representing the translation table to use, following NCBI numbering. Defaults to 1.input.fasta
- a multi fasta file containing DNA sequences to be analysed.
Dependencies
~20–30MB
~446K SLoC